Original articles in indexed journals - Integrative Biomedical Informatics

Perez-Granado J, Piñero J, Furlong LI. Benchmarking post-GWAS analysis tools in major depression: Challenges and implications. Front Genet, 2022; 13: 1006903. PMID: 36276939 . DOI: 10.3389/fgene.2022.1006903.

2022

Other - Structural Bioinformatics

Villanueva-Canas JL, Fernandez-Fuentes N, Teyssier C, Ewa Rogalska M, Pegenaute Perez F, Oliva B, Notredame C, Beato M, Sharma P. Evolutionary insights reveal a new role of PADI2 in transcriptional elongation. bioRxiv, 2022 DOI: 10.1101/2022.09.19.508513.

2022

Original articles in indexed journals - Structural Bioinformatics

Fernández-Ginés R, Encinar JA, Hayes JD, Oliva B, Rodríguez-Franco MI, Rojo AI, Cuadrado A. An inhibitor of interaction between the transcription factor NRF2 and the E3 ubiquitin ligase adapter β-TrCP delivers anti-inflammatory responses in mouse liver. Redox Biol. 2022 Jul 11;55:102396. PMID: 35839629 . DOI: 10.1016/j.redox.2022.102396.

2022

Original articles in indexed journals - NeuroGenomics

Sadeghi I, Gispert JD, Palumbo E, Muñoz-Aguirre M, Wucher V, D'Argenio V, Santpere G, Navarro A, Guigo R, Vilor-Tejedor N. Brain transcriptomic profiling reveals common alterations across neurodegenerative and psychiatric disorders. Computational and Structural Biotechnology Journal, 2022; 20: 4549-4561. DOI: 10.1016/j.csbj.2022.08.037.

2022

Original articles in indexed journals - NeuroGenomics

Ma S, Skarica M, Li Q, Xu C, Risgaard RD, Tebbenkamp ATN, Mato-Blanco X, Kovner R, Krsnik Ž, de Martin X, Luria V, Martí-Pérez X, Liang D, Karger A, Schmidt DK, Gomez-Sanchez Z, Qi C, Gobeske KT, Pochareddy S, Debnath A, Hottman CJ, Spurrier J, Teo L, Boghdadi AG, Homman-Ludiye J, Ely JJ, Daadi EW, Mi D, Daadi M, Marín O, Hof PR, Rasin MR, Bourne J, Sherwood CC, Santpere G, Girgenti MJ, Strittmatter SM, Sousa AMM, Sestan N. Molecular and cellular evolution of the primate dorsolateral prefrontal cortex. Science, 2022; eabo7257. PMID: 36007006 . DOI: 10.1126/science.abo7257.

2022

Original articles in indexed journals - Structural Bioinformatics

Mestre-Farràs N, Guerrero S, Bley N, Rivero E, Coll O, Borràs E, Sabido E, Indacochea A, Casillas-Serra C, Järvelin AI, Oliva B, Castello A, Hüttelmaier S, Gebauer F. Melanoma RBPome identification reveals PDIA6 as an unconventional RNA-binding protein involved in metastasis. Nucleic acids research, 2022; 50, 14, 8207-8225. 35848924. DOI: 10.1093/nar/gkac605.

2022

Original articles in indexed journals - GPCR Drug Discovery

Baidya M, Chaturvedi M, Dwivedi-Agnihotri H, Ranjan A, Devost D, Namkung Y, Stepniewski TM, Pandey S, Baruah M, Panigrahi B, Sarma P, Yadav MK, Maharana J, Banerjee R, Kawakami K, Inoue A, Selent J, Laporte SA, Hébert TE, Shukla AK. Allosteric modulation of GPCR-induced β-arrestin trafficking and signaling by a synthetic intrabody. Nat Commun, 2022; 13(1): 4634. PMID: 35941121 . DOI: 10.1038/s41467-022-32386-x.

2022

Original articles in indexed journals - Integrative Biomedical Informatics

Leis A, Casadevall D, Albanell J, Posso M, Macià F, Castells X, Ramírez-Anguita JM, Martínez Roldán J, Furlong LI, Sanz F, Ronzano F, Mayer MA. Exploring the Association of Cancer and Depression in Electronic Health Records: Combining Encoded Diagnosis and Mining Free-Text Clinical Notes. JMIR Cancer, 2022; 8(3): e39003. PMID: 35816382 . DOI: 10.2196/39003.

2022

Original articles in indexed journals - Integrative Biomedical Informatics

Perez-Granado J, Piñero J, Medina-Rivera A, Furlong LI. Functional Genomics Analysis to Disentangle the Role of Genetic Variants in Major Depression. Genes (Basel), 2022; 13(7): 1259. PMID: 35886042 . DOI: 10.3390/genes13071259.

2022

Other - Structural Bioinformatics

Galletti C, Aguirre-Plans J, Oliva B, Fernandez-Fuentes N. Prediction of Adverse Drug Reaction Linked to Protein Targets Using Network-Based Information and Machine Learning. Front Bioinform. 2022 Jul 14;2:906644. PMID: 36304303 . DOI: 10.3389/fbinf.2022.906644.

2022